Hi there - and good morning..
two problems in downloads -
1) bad md5
2) wrong size
Can you, please, help?
edit-------------- i forgot to reference
https://malariacontrol.net/results.php?userid=52017&offset=0&show_names=0&state=5
https://malariacontrol.net/result.php?resultid=150196550
https://malariacontrol.net/result.php?resultid=150196729
https://malariacontrol.net/result.php?resultid=150196731
end edit ---------
about my platform and BOINC
... edited...
Sat 29 Dec 2012 08:02:16 AM EST
Starting BOINC client version 6.10.58 for i686-pc-linux-gnu
Libraries: libcurl/7.21.0 OpenSSL/0.9.8o zlib/1.2.3.4 libidn/1.15 libssh2/1.2.6
I'm running Debian Linux
Release 6.0.6
Kernel Linux 2.6.32-5-686
Gnome 2.30.2
Intel dual processor T2300 @1.66Ghz
Memory 2.0GB
Had been running SETI, the was switching bac to MC and had errors.
Message tab says (older version BOINC)
I'll edit out redundant header
Sat 29 Dec 2012 08:38:44 AM EST malariacontrol.net work fetch suspended by user
work fetch resumed by user
Sending scheduler request: To fetch work.
Reporting 2 completed tasks, requesting new tasks
Scheduler request completed: got 1 new tasks
Started download of densities.csv
Started download of scenario_29.xsd
Finished download of densities.csv
Started download of wu_3001_29_953937_0_1356787754
[error] MD5 check failed for densities.csv
[error] expected d41d8cd98f00b204e9800998ecf8427e, got 54ea34d38d96c311122642aec045bc40
[error] Checksum or signature error for densities.csv
Finished download of scenario_29.xsd
Finished download of wu_3001_29_953937_0_1356787754
[error] File scenario_29.xsd has wrong size: expected 40960, got 141319
Sat 29 Dec 2012 08:39:29 AM EST malariacontrol.net
[error] Checksum or signature error for scenario_29.xsd
I looked, did a grep and saw, in clien_state.xml
selected output from
jay@pc2-linux:/var/lib/boinc-client$ cat client_state.xml
<url>https://malariacontrol.net/download/openMalariaA_6.58_i686-pc-linux-gnu</url>
</file_info>
<file_info>
<name>densities.csv</name>
<nbytes>0.000000</nbytes>
<max_nbytes>0.000000</max_nbytes>
<md5_cksum>d41d8cd98f00b204e9800998ecf8427e</md5_cksum>
<status>-119</status>
<url>https://malariacontrol.net/download/2c4/densities.csv</url>
<error_msg>
MD5 check failed
</error_msg>
<stderr_out>
<![CDATA[
<message>
WU download error: couldn't get input files:
<file_xfer_error>
<file_name>densities.csv</file_name>
<error_code>-119</error_code>
<error_message>MD5 check failed</error_message>
</file_xfer_error>
<file_xfer_error>
<file_name>scenario_29.xsd</file_name>
<error_code>-200</error_code>
</file_xfer_error>
</message>
</stderr_out>
<ready_to_report/>
<completed_time>1356788442.810757</completed_time>
<wu_name>wu_2903_326_948455_0_1356387667</wu_name>
<report_deadline>1357188441.000000</report_deadline>
<received_time>1356788437.070927</received_time>
<file_ref>
<file_name>wu_2903_326_948455_0_1356387667_2_0</file_name>
<open_name>output.txt.gz</open_name>
</file_ref>
<file_ref>
<file_name>wu_2903_326_948455_0_1356387667_2_1</file_name>
<open_name>scenario.sum</open_name>
</file_ref>
</result>
a similar post said to see if the file existed.
the density file existed...
the 'densities file exists.
root@pc2-linux:/var/lib/boinc-client/projects/malariacontrol.net# l
total 10860
drwxrwx--x 2 113 122 4096 Dec 29 08:40 .
drwxrwx--x 4 113 122 4096 Aug 14 06:33 ..
-rw-r--r-- 1 113 122 20185 Dec 29 08:38 autoRegressionParameters.csv
-rw-r--r-- 1 113 122 38132 Dec 29 08:40 densities.csv
-rwxr-xr-x 1 113 122 10854568 Aug 14 06:34 openMalariaA_6.58_i686-pc-linux-gnu
-rw-r--r-- 1 113 122 141319 Dec 29 08:40 scenario_29.xsd
-rw-r--r-- 1 113 122 28619 Dec 29 08:40 wu_2903_326_948455_0_1356387667
a head and tail
5day,Duration,Meanlog(Georgia,self-cleared subset)
1,1,8.13
1,2,8.04
2,2,8.52
1,3,7.47
2,3,9.46
3,3,8.96
1,4,7.06
2,4,9.35
3,4,10.13
4,4,8.22
...
73,84,0.91
74,84,1.01
75,84,0.33
76,84,0.18
77,84,0.17
78,84,0.16
79,84,0.18
80,84,0.32
81,84,0.89
82,84,1.04
83,84,1.48
84,84,1.17
--------
and a wc
root@pc2-linux:/var/lib/boinc-client/projects/malariacontrol.net# wc densities.csv
3570 3572 38132 densities.csv
I looked at the data. it looked OK to me - not garbled.
Now, the second problem
[error] File scenario_29.xsd has wrong size:
expected 40960, got 141319
root@pc2-linux:/var/lib/boinc-client/projects/malariacontrol.net# ls -al
total 10860
drwxrwx--x 2 boinc boinc 4096 Dec 29 08:40 .
drwxrwx--x 4 boinc boinc 4096 Aug 14 06:33 ..
-rw-r--r-- 1 boinc boinc 20185 Dec 29 08:38 autoRegressionParameters.csv
-rw-r--r-- 1 boinc boinc 38132 Dec 29 08:40 densities.csv
-rwxr-xr-x 1 boinc boinc 10854568 Aug 14 06:34 openMalariaA_6.58_i686-pc-linux-gnu
-rw-r--r-- 1 boinc boinc 141319 Dec 29 08:40 scenario_29.xsd
-rw-r--r-- 1 boinc boinc 28619 Dec 29 08:40 wu_2903_326_948455_0_1356387667
I took a look at it. Nothing stood out.
Could it possibly be the way UTF characters are counted?
as in formulas?
Killing proportion is calculated as K = B + HÃh + PÃp + IÃhÃp
where B is the base (without net) probability of death,
H, P and I are the hole, insecticide and interaction factors
respectively, h=exp(-holeIndexÃholeScalingFactor) and
p=1âexp(-insecticideContentÃinsecticideScalingFactor).
Thanks in advance.
Best wishes for a happy new year.
Jay
/ 
Hi jay,
Haapy new year too.
MmMmMmM ... Strange :
1) Doing a md5sum on the file directrly on the server gave me 54ea34d38d96c311122642aec045bc40 so the file you have is correct.
2) same thing for scenario_29.xsd the size you have is the correct : 141319
Maybe ... the information you got from the server have somehow been corrupted during the transfert which could explain the difference between MD5s and also the filesize.
First some quick and dirty fix :Could you try to do a reset on the BOINC Client for malariacontrol project.
If it doesn't work :
- did it happen again between the date of the post and today ?
- is it for all the workunits you're getting or only some of them ?
- could you copy/paste new references the one you wrote have already been purged
Thanks,
Michael.
/